The detailed information of tRNA gene sequence


Sequence ID>WENV170656498
Genome IDJTFO01019685
Search identical group
Phylum/Class[JTFO] activated sludge metagenome; CETP activated sludge from laboratory augmented bioreactor treating industrial wastewater
Species
Start position on genome 829
End posion on genome 741
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cgtttgtatt
tRNA gene sequence 
GGAGAGATGCTCGAGTGGTTGAAGAGGCACGCCTGGAAAGCGTGTATACGCCTAAAGCGT
ATCGCGGGTTCGAATCCCGCTCTCTCCGCat
Downstream region at tRNA end position 
aatatcatga
Secondary structure (Cloverleaf model)
>WENV170656498	Ser	GGA
                   t      GCat aatatcatga
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C G C C C     A
      T G A        G      | | | | |     G
    G       G C T C       G C G G G     C
    G         | | |                 T T
    T       A G A G
      T G A        G     TATACGCCTAAAGCGTATC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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