The detailed information of tRNA gene sequence


Sequence ID>WENV170656540
Genome IDJTFO01022949
Search identical group
Phylum/Class[JTFO] activated sludge metagenome; CETP activated sludge from laboratory augmented bioreactor treating industrial wastewater
Species
Start position on genome 1232
End posion on genome 1321
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cagggtacag
tRNA gene sequence 
GGAAGTGTGGGTGAGTGGCTGAAACCAGCAGTTTGCTAAACTGCCGTACGGGTAACCGTA
CCACGAGTTCGAATCTCGTCGCTTCCGCTA
Downstream region at tRNA end position 
cagagtcgga
Secondary structure (Cloverleaf model)
>WENV170656540	Ser	GCT
                   g      GCTA cagagtcgga
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     T + G
                     G - C          T A
                    T     T G C T C     A
      T G A        G      | | | | |     G
    G       G T G G       A C G A G     C
    G         | | |                 T T
    C       A A C C
      T G A        A     CGTACGGGTAACCGTACC
                    G - C
                    C - G
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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