The detailed information of tRNA gene sequence


Sequence ID>WENV170656568
Genome IDJTFO01025765
Search identical group
Phylum/Class[JTFO] activated sludge metagenome; CETP activated sludge from laboratory augmented bioreactor treating industrial wastewater
Species
Start position on genome 284
End posion on genome 194
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
acagtttatt
tRNA gene sequence 
GGAGAGGTGTCCGAGTGGCTGAAGGAGCACGCCTGGAAAGTGTGTATACGTTAATAGCGT
ATCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
ataaaagaac
Secondary structure (Cloverleaf model)
>WENV170656568	Ser	GGA
                   t      GCCA ataaaagaac
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G A G G G     C
    G         | | |                 T T
    C       A G G A
      T G A        G     TATACGTTAATAGCGTATC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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