The detailed information of tRNA gene sequence


Sequence ID>WENV170656591
Genome IDJTFO01026680
Search identical group
Phylum/Class[JTFO] activated sludge metagenome; CETP activated sludge from laboratory augmented bioreactor treating industrial wastewater
Species
Start position on genome 337
End posion on genome 426
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
taaaaaataa
tRNA gene sequence 
GGAAGGGTGGCAGAGCACGGTTTATTGCAGCGGTCTTGAAAACCGCCGAACCGCAAGGTT
CCGAGAGTTCAAATCTCTCTCCTTCCTCCA
Downstream region at tRNA end position 
tttttgaact
Secondary structure (Cloverleaf model)
>WENV170656591	Ser	TGA
                   a      TCCA tttttgaact
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     G + T          T A
                    T     C T C T C     A
    A C G A        G      | | | | |     A
  C         G A C G       G A G A G     C
  G         + | | |                 T T
  G         T T G C
    T T T A        A     CGAACCGCAAGGTTCC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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