The detailed information of tRNA gene sequence


Sequence ID>WENV170656628
Genome IDJTFO01029256
Search identical group
Phylum/Class[JTFO] activated sludge metagenome; CETP activated sludge from laboratory augmented bioreactor treating industrial wastewater
Species
Start position on genome 133
End posion on genome 227
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
aggttataga
tRNA gene sequence 
GGAAGATCGTCGTCTCCGGTGAGGCGGCTGGATTTCAAATCCAGTTGGGGCTGCCAGCAG
TCCCGGGCAGGTTCGACTCCTGTGATCTTCCGCCA
Downstream region at tRNA end position 
aacgcagttt
Secondary structure (Cloverleaf model)
>WENV170656628	SeC(p)	TCA
                   a      GCCA aacgcagttt
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     A - T
                     T - A
                     C - G          T C
                    G     T G T C C     A
      C C T        T      + | | | |     G
    G       C T G C       G C A G G     C
    G       | + | |                 T T
    T       G G C G
      G A          G     TTGGGGCTGCCAGCAGTCCCGG
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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