The detailed information of tRNA gene sequence


Sequence ID>WENV170656665
Genome IDJTFO01031566
Search identical group
Phylum/Class[JTFO] activated sludge metagenome; CETP activated sludge from laboratory augmented bioreactor treating industrial wastewater
Species
Start position on genome 1010
End posion on genome 1103
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
acgagagcga
tRNA gene sequence 
GGAAGCGTTTCGTCACCGGTGTGGCGCCTGGACTTCAAATCCAGTGGACGGTCGAGAGGT
CGTCGGTAGGTTCGACTCCTATACGCTTCCGCCA
Downstream region at tRNA end position 
taaggaaccc
Secondary structure (Cloverleaf model)
>WENV170656665	SeC(p)	TCA
                   a      GCCA taaggaaccc
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     G - C
                     T - A          T C
                    T     T A T C C     A
      C C A        T      + | | | |     G
    G       C T G C       G T A G G     C
    G       | + | |                 T T
    T       G G C G
      G T          C     TGGACGGTCGAGAGGTCGTCG
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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