The detailed information of tRNA gene sequence


Sequence ID>WENV170656678
Genome IDJTFO01032945
Search identical group
Phylum/Class[JTFO] activated sludge metagenome; CETP activated sludge from laboratory augmented bioreactor treating industrial wastewater
Species
Start position on genome 1266
End posion on genome 1177
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
nnnnnnnnna
tRNA gene sequence 
GGAAGCGTGCCAGAGCGGTTGAATGGACCGGTCTTGAAAACCGGCGATGGGGTAACCCAT
CCGTGAGTTCGAATCTCACCGCTTCCGCCA
Downstream region at tRNA end position 
tcatctcccg
Secondary structure (Cloverleaf model)
>WENV170656678	Ser	TGA
                   a      GCCA tcatctcccg
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     G - C          T A
                    T     C A C T C     A
      C G A        G      | | | | |     G
    G       G A C C       G T G A G     C
    G         | | |                 T T
    T       A T G G
      T G A        A     CGATGGGGTAACCCATCC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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