The detailed information of tRNA gene sequence


Sequence ID>WENV170656709
Genome IDJTFO01036131
Search identical group
Phylum/Class[JTFO] activated sludge metagenome; CETP activated sludge from laboratory augmented bioreactor treating industrial wastewater
Species
Start position on genome 449
End posion on genome 362
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tttgtagagt
tRNA gene sequence 
GGTCAGGTGTCCGAGTGGCCGAAGGAGCACGCCTGGAAAGTGTGTATGTCGAAAGGCATC
GAGGGTTCGAATCCCTCCCTGACCGCCA
Downstream region at tRNA end position 
tttcccttta
Secondary structure (Cloverleaf model)
>WENV170656709	Ser	GGA
                   t      GCCA tttcccttta
                     G - C
                     G - C
                     T - A
                     C - G
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G A G G G     C
    G         | | |                 T T
    C       A G G A
      C G A        G     TATGTCGAAAGGCATC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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