The detailed information of tRNA gene sequence


Sequence ID>WENV170656769
Genome IDJTFO01041945
Search identical group
Phylum/Class[JTFO] activated sludge metagenome; CETP activated sludge from laboratory augmented bioreactor treating industrial wastewater
Species
Start position on genome 395
End posion on genome 485
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gactttggtt
tRNA gene sequence 
GGAGTAATACTCAAGTGGCTAAAGAGGCGCCCCTGCTAAGGGCGTAGGCTGGGAAACCGG
TGCGAGGGTTCAAATCCCTCTTACTCCGCCA
Downstream region at tRNA end position 
tcttttttat
Secondary structure (Cloverleaf model)
>WENV170656769	Ser	GCT
                   t      GCCA tcttttttat
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     A - T
                     A - T          T A
                    T     C T C C C     A
      T G A        A      | | | | |     A
    G       A C T C       G A G G G     C
    G         | | |                 T T
    C       A G A G
      T A A        G     TAGGCTGGGAAACCGGTGC
                    C - G
                    G - C
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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