The detailed information of tRNA gene sequence


Sequence ID>WENV170656777
Genome IDJTFO01042707
Search identical group
Phylum/Class[JTFO] activated sludge metagenome; CETP activated sludge from laboratory augmented bioreactor treating industrial wastewater
Species
Start position on genome 107
End posion on genome 194
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tgcgaggcga
tRNA gene sequence 
GGAGGAATGTCCGAATTGGCTAAGGGGCCGGTCTTGAAAACCGGTGAAACCGCAAGGTGT
CTGGGTTCGAGTCCCAGTTCCTCCGCCA
Downstream region at tRNA end position 
tttttttttc
Secondary structure (Cloverleaf model)
>WENV170656777	Ser	TGA
                   a      GCCA tttttttttc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     A - T          T G
                    T     G A C C C     A
      T A A        G      | | | | |     G
    T       G C C T       C T G G G     C
    G         | | +                 T T
    G       A G G G
      C T A        G     TGAAACCGCAAGGTGT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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