The detailed information of tRNA gene sequence


Sequence ID>WENV170656778
Genome IDJTFO01042707
Search identical group
Phylum/Class[JTFO] activated sludge metagenome; CETP activated sludge from laboratory augmented bioreactor treating industrial wastewater
Species
Start position on genome 237
End posion on genome 329
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gagatagtgt
tRNA gene sequence 
GGAGAGATGGCAGAGCTGGCCGAATGCGCTCCCCTGCTAAGGGAGTATCCGGGTAACACT
GGATCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
cttgttaaag
Secondary structure (Cloverleaf model)
>WENV170656778	Ser	GCT
                   t      GCCA cttgttaaag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
    T C G A        G      | | | | |     G
  G         G A C G       G A G G G     C
  G           | | |                 T T
  C         A T G C
    C G A          G     TATCCGGGTAACACTGGATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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