The detailed information of tRNA gene sequence


Sequence ID>WENV170656822
Genome IDJTFO01047402
Search identical group
Phylum/Class[JTFO] activated sludge metagenome; CETP activated sludge from laboratory augmented bioreactor treating industrial wastewater
Species
Start position on genome 235
End posion on genome 310
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
gagccaaaaa
tRNA gene sequence 
GGCCCTATAGTTTAATTGGTTAGAATACAGGACTTTCAATTCTGTGACACCGGTTCAATC
CCGGTTAGGGTCACCA
Downstream region at tRNA end position 
cttttaaaat
Secondary structure (Cloverleaf model)
>WENV170656822	Glu	TTC
                   a      ACCA cttttaaaat
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     T - A
                     A - T          C T
                    T     T G G C C     A
      T A A        A      | | | | |     A
    T       T T T G       A C C G G     C
    G       + | | +                 T T
    G       G A A T
      T T A        A     TGAC
                    C - G
                    A - T
                    G - C
                    G + T
                    A - T
                  C       A
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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