The detailed information of tRNA gene sequence


Sequence ID>WENV170656842
Genome IDJTFO01051311
Search identical group
Phylum/Class[JTFO] activated sludge metagenome; CETP activated sludge from laboratory augmented bioreactor treating industrial wastewater
Species
Start position on genome 104
End posion on genome 193
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gccagattaa
tRNA gene sequence 
GGAAGGGTGCATGAGTGGTTGAAATGGCCTCCCTGCTAAGGAGTGAGTCAGTAAAATGGC
ACGAGGGTTCGAATCCCTCTCCTTCCGCCA
Downstream region at tRNA end position 
aattaaatag
Secondary structure (Cloverleaf model)
>WENV170656842	Ser	GCT
                   a      GCCA aattaaatag
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     G + T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T A C       G A G G G     C
    G         | | |                 T T
    T       A A T G
      T G A        G     GAGTCAGTAAAATGGCAC
                    C   T
                    C - G
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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