The detailed information of tRNA gene sequence


Sequence ID>WENV170656860
Genome IDJTFO01052766
Search identical group
Phylum/Class[JTFO] activated sludge metagenome; CETP activated sludge from laboratory augmented bioreactor treating industrial wastewater
Species
Start position on genome 192
End posion on genome 281
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
agcctgaaca
tRNA gene sequence 
GGAAAGATGCCGGAGTGGTCGATCGGGGCGGTCTCGAAAACCGTTGTACTCTCACGGGTA
CCAAGGGTTCGAATCCCTTTCTTTCCGCAA
Downstream region at tRNA end position 
ttgatgccta
Secondary structure (Cloverleaf model)
>WENV170656860	Ser	CGA
                   a      GCAA ttgatgccta
                     G - C
                     G - C
                     A - T
                     A - T
                     A - T
                     G - C
                     A - T          T A
                    T     T T C C C     A
      T G A        G      | | | | |     G
    G       G G C C       A A G G G     C
    G       + | | |                 T T
    T       T C G G
      C G A        G     TGTACTCTCACGGGTACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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