The detailed information of tRNA gene sequence


Sequence ID>WENV170656899
Genome IDJTFO01057151
Search identical group
Phylum/Class[JTFO] activated sludge metagenome; CETP activated sludge from laboratory augmented bioreactor treating industrial wastewater
Species
Start position on genome 101
End posion on genome 12
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ccaaggaata
tRNA gene sequence 
GGAAGCGTGCCAGAGCGGTTGAATGGACCGGTCTTGAAAACCGGCGATGGGGTAACCCAT
CCGTGAGTTCGAATCTCACCGCTTCCGCCA
Downstream region at tRNA end position 
tcatctcccg
Secondary structure (Cloverleaf model)
>WENV170656899	Ser	TGA
                   a      GCCA tcatctcccg
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     G - C          T A
                    T     C A C T C     A
      C G A        G      | | | | |     G
    G       G A C C       G T G A G     C
    G         | | |                 T T
    T       A T G G
      T G A        A     CGATGGGGTAACCCATCC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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