The detailed information of tRNA gene sequence


Sequence ID>WENV170656974
Genome IDJTFO01065612
Search identical group
Phylum/Class[JTFO] activated sludge metagenome; CETP activated sludge from laboratory augmented bioreactor treating industrial wastewater
Species
Start position on genome 1230
End posion on genome 1154
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
cgccatatct
tRNA gene sequence 
CGGGAAGTAGCTTAGCTTGGTAGAGCGCCTGGTTTGGGACCAGGAGGTCGCAGGTTCAAA
TCCTGTCTTCCCGACCA
Downstream region at tRNA end position 
cgatatgcgg
Secondary structure (Cloverleaf model)
>WENV170656974	Pro	TGG
                   t      ACCA cgatatgcgg
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     T G T C C     A
      C G A        A      + | | | |     A
    T       T T C G       G C A G G     C
    T       + | | |                 T T
    G       G A G C
      G T A        G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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