The detailed information of tRNA gene sequence


Sequence ID>WENV170657055
Genome IDJTFO01073049
Search identical group
Phylum/Class[JTFO] activated sludge metagenome; CETP activated sludge from laboratory augmented bioreactor treating industrial wastewater
Species
Start position on genome 595
End posion on genome 671
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
cccgcctagt
tRNA gene sequence 
CGGGGCGTAGCGCAGTCTGGTAGCGCACTTGCATGGGGTGCAAGGGGTCGCAGGTTCAAA
TCCTGCCGTCCCGACCA
Downstream region at tRNA end position 
ttaactccct
Secondary structure (Cloverleaf model)
>WENV170657055	Pro	GGG
                   t      ACCA ttaactccct
                     C - G
                     G - C
                     G - C
                     G - C
                     G + T
                     C - G
                     G - C          T A
                    T     C G T C C     A
      T G A        A      | | | | |     A
    C       C G C G       G C A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  A       T
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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