The detailed information of tRNA gene sequence


Sequence ID>WENV170657058
Genome IDJTFO01073822
Search identical group
Phylum/Class[JTFO] activated sludge metagenome; CETP activated sludge from laboratory augmented bioreactor treating industrial wastewater
Species
Start position on genome 2379
End posion on genome 2304
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
gccattatta
tRNA gene sequence 
GGCTCTGTAGCTCAGTTGGTAGAGCAAAGGACTGAAAATCCTTGTGTCGGCAGTTCAATT
CTGCCCGGAGCCACCA
Downstream region at tRNA end position 
tccatacctt
Secondary structure (Cloverleaf model)
>WENV170657058	Phe	GAA
                   a      ACCA tccatacctt
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     T + G
                     G - C          T T
                    T     C C G T C     A
      T G A        A      | | | | |     A
    T       C T C G       G G C A G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTC
                    A - T
                    A - T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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