The detailed information of tRNA gene sequence


Sequence ID>WENV170657065
Genome IDJTFO01074725
Search identical group
Phylum/Class[JTFO] activated sludge metagenome; CETP activated sludge from laboratory augmented bioreactor treating industrial wastewater
Species
Start position on genome 1570
End posion on genome 1493
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ctccctatta
tRNA gene sequence 
GGGCCTATAGCTCAGTTGGTTAGTAGCAGTGGGCTCATAACCCATTGGTCACAGGTTCAA
GTCCTGTTGGGCCCACCA
Downstream region at tRNA end position 
tacgttaaaa
Secondary structure (Cloverleaf model)
>WENV170657065	Met	CAT
                   a      ACCA tacgttaaaa
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     A - T          T G
                    T     T G T C C     A
    T T G A        A      | | | | |     A
  G         C T C G       A C A G G     C
  G           | | |                 T T
  T         T A G C
    T A G          A     TGGTC
                    G + T
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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