The detailed information of tRNA gene sequence


Sequence ID>WENV170657076
Genome IDJTFO01079640
Search identical group
Phylum/Class[JTFO] activated sludge metagenome; CETP activated sludge from laboratory augmented bioreactor treating industrial wastewater
Species
Start position on genome 26
End posion on genome 117
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
taacatagtc
tRNA gene sequence 
GGAAGAGTATCGAAGTGGTTGTAACGAGCTGCCCTCGAAATGCAGTTGTCCTCAAAAGGG
GCACGTGGGTTCGAATCCCATCTCTTCCGCCA
Downstream region at tRNA end position 
tattagcacg
Secondary structure (Cloverleaf model)
>WENV170657076	Ser	CGA
                   c      GCCA tattagcacg
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     A - T
                     G - C          T A
                    T     T A C C C     A
    G T G A        A      + | | | |     G
  G         A G C T       G T G G G     C
  T           | | |                 T T
  T         A C G A
    G T A          G     TTGTCCTCAAAAGGGGCAC
                    C - G
                    T - A
                    G - C
                    C - G
                    C   T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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