The detailed information of tRNA gene sequence


Sequence ID>WENV170657082
Genome IDJTFO01081193
Search identical group
Phylum/Class[JTFO] activated sludge metagenome; CETP activated sludge from laboratory augmented bioreactor treating industrial wastewater
Species
Start position on genome 284
End posion on genome 373
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aattttgagt
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGTTGAAGGCGCACGCCTGGAAAGTGTGTATACGGGGAACCGTA
TCGCGGGTTCGAATCCCGCTCTCTCCGCCA
Downstream region at tRNA end position 
gaagcttttt
Secondary structure (Cloverleaf model)
>WENV170657082	Ser	GGA
                   t      GCCA gaagcttttt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C G C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G C G G G     C
    G         | | |                 T T
    T       A G G C
      T G A        G     TATACGGGGAACCGTATC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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