The detailed information of tRNA gene sequence


Sequence ID>WENV170657106
Genome IDJTFO01084044
Search identical group
Phylum/Class[JTFO] activated sludge metagenome; CETP activated sludge from laboratory augmented bioreactor treating industrial wastewater
Species
Start position on genome 524
End posion on genome 437
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
nnnnnnatgc
tRNA gene sequence 
GGTCAGGTGTCCGAGTGGCTGAAGGAGCACGCCTGGAAAGTGTGTATACGGCAACGTATC
GAGGGTTCGAATCCCTCCCTGACCGCCA
Downstream region at tRNA end position 
tttttccttt
Secondary structure (Cloverleaf model)
>WENV170657106	Ser	GGA
                   c      GCCA tttttccttt
                     G - C
                     G - C
                     T - A
                     C - G
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G A G G G     C
    G         | | |                 T T
    C       A G G A
      T G A        G     TATACGGCAACGTATC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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