The detailed information of tRNA gene sequence


Sequence ID>WENV170657130
Genome IDJTFO01089630
Search identical group
Phylum/Class[JTFO] activated sludge metagenome; CETP activated sludge from laboratory augmented bioreactor treating industrial wastewater
Species
Start position on genome 286
End posion on genome 197
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gcgattgata
tRNA gene sequence 
GGAAGCGTGCCAGAGCGGTTGAATGGACCGGTCTTGAAAACCGGCGATGGGGTAACCCAT
CCGTGAGTTCGAATCTCACCGCTTCCGCCA
Downstream region at tRNA end position 
tcaactcccg
Secondary structure (Cloverleaf model)
>WENV170657130	Ser	TGA
                   a      GCCA tcaactcccg
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     G - C          T A
                    T     C A C T C     A
      C G A        G      | | | | |     G
    G       G A C C       G T G A G     C
    G         | | |                 T T
    T       A T G G
      T G A        A     CGATGGGGTAACCCATCC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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