The detailed information of tRNA gene sequence


Sequence ID>WENV170657143
Genome IDJTFO01091284
Search identical group
Phylum/Class[JTFO] activated sludge metagenome; CETP activated sludge from laboratory augmented bioreactor treating industrial wastewater
Species
Start position on genome 922
End posion on genome 832
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tcatcgtcaa
tRNA gene sequence 
GGAGGAGTGGCCGAGCGGTCGAAGGCGCTTGACTCGAAATCAAGTGAGGGGCTCTGCTCC
TCCGTGGGTTCAAATCCCACCTCCTCCGCCA
Downstream region at tRNA end position 
ctgcaacttt
Secondary structure (Cloverleaf model)
>WENV170657143	Ser	CGA
                   a      GCCA ctgcaacttt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     A
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TGAGGGGCTCTGCTCCTCC
                    C - G
                    T - A
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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