The detailed information of tRNA gene sequence


Sequence ID>WENV170657163
Genome IDJTFO01094296
Search identical group
Phylum/Class[JTFO] activated sludge metagenome; CETP activated sludge from laboratory augmented bioreactor treating industrial wastewater
Species
Start position on genome 18
End posion on genome 106
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tccgttgcgt
tRNA gene sequence 
GGAGAGATGGCCGAGTGGTCGAAGGCGCGCGCCTGCTAAGTGCGTGACCCGTTCCGGGTC
CGAGGGTTCAAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
ccgatagtgc
Secondary structure (Cloverleaf model)
>WENV170657163	Ser	GCT
                   t      GCCA ccgatagtgc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     A
    G       G C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TGACCCGTTCCGGGTCC
                    C - G
                    G - C
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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