The detailed information of tRNA gene sequence


Sequence ID>WENV170657197
Genome IDJTFO01100020
Search identical group
Phylum/Class[JTFO] activated sludge metagenome; CETP activated sludge from laboratory augmented bioreactor treating industrial wastewater
Species
Start position on genome 787
End posion on genome 876
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
caatgcagag
tRNA gene sequence 
GGAAGTGTGGGTGAGTGGCTGAAACCAGCAGTTTGCTAAACTGCCGTACGGGTAACCGTA
CCACGAGTTCGAATCTCGTCGCTTCCGCAA
Downstream region at tRNA end position 
cagatagagt
Secondary structure (Cloverleaf model)
>WENV170657197	Ser	GCT
                   g      GCAA cagatagagt
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     T + G
                     G - C          T A
                    T     T G C T C     A
      T G A        G      | | | | |     G
    G       G T G G       A C G A G     C
    G         | | |                 T T
    C       A A C C
      T G A        A     CGTACGGGTAACCGTACC
                    G - C
                    C - G
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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