The detailed information of tRNA gene sequence


Sequence ID>WENV170657198
Genome IDJTFO01100592
Search identical group
Phylum/Class[JTFO] activated sludge metagenome; CETP activated sludge from laboratory augmented bioreactor treating industrial wastewater
Species
Start position on genome 223
End posion on genome 310
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cgcgccccat
tRNA gene sequence 
GGAGAGATGGCCGAGCGGTCGAAGGCAGCGGTCTTGAAAACCGCCGATGGGAAACCATCC
TAGAGTTCGAATCTCTATCTCTCCGCCA
Downstream region at tRNA end position 
tattcgccgg
Secondary structure (Cloverleaf model)
>WENV170657198	Ser	TGA
                   t      GCCA tattcgccgg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     A T C T C     A
      C G A        G      | | | | |     G
    G       G C C G       T A G A G     C
    G         | | |                 T T
    T       A G G C
      C G A        A     CGATGGGAAACCATCC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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