The detailed information of tRNA gene sequence


Sequence ID>WENV170657224
Genome IDJTFO01105029
Search identical group
Phylum/Class[JTFO] activated sludge metagenome; CETP activated sludge from laboratory augmented bioreactor treating industrial wastewater
Species
Start position on genome 425
End posion on genome 348
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
gcccttcgtc
tRNA gene sequence 
CGGGGTGTAGCGCAGTCTGGTTAGCGTGCCTCGTTCGGGACGAGGAGGTCGGAGGTTCAA
ATCCTCTCACCCCGACCA
Downstream region at tRNA end position 
gaccgaaaga
Secondary structure (Cloverleaf model)
>WENV170657224	Pro	CGG
                   c      ACCA gaccgaaaga
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     T C T C C     A
    C T G A        A      + | | | |     A
  T         C G C G       G G A G G     C
  G         | | | +                 T T
  G         G C G T
    T T A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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