The detailed information of tRNA gene sequence


Sequence ID>WENV170657239
Genome IDJTFO01109168
Search identical group
Phylum/Class[JTFO] activated sludge metagenome; CETP activated sludge from laboratory augmented bioreactor treating industrial wastewater
Species
Start position on genome 31
End posion on genome 123
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cttttttgct
tRNA gene sequence 
GGGAATGTGGCCGAGAGGTTGAAGGTACTCCCCTGCTAAGGGAGCATGCGGCTTATACCC
GCATCGAGGGTTCGAATCCCTCCATTCCCGCCA
Downstream region at tRNA end position 
gcgaaatttg
Secondary structure (Cloverleaf model)
>WENV170657239	Ser	GCT
                   t      GCCA gcgaaatttg
                     G - C
                     G - C
                     G - C
                     A - T
                     A - T
                     T - A
                     G - C          T A
                    T     C T C C C     A
      A G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | +                 T T
    T       A G G T
      T G A        A     CATGCGGCTTATACCCGCATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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