The detailed information of tRNA gene sequence


Sequence ID>WENV170657248
Genome IDJTFO01110541
Search identical group
Phylum/Class[JTFO] activated sludge metagenome; CETP activated sludge from laboratory augmented bioreactor treating industrial wastewater
Species
Start position on genome 198
End posion on genome 123
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gtcacggtat
tRNA gene sequence 
AGGGGTATAGCTCAATTGGCAGAGCGTCGGTCTCCAAAACCGAAGGTTGAGGGTTCGATT
CCTTCTGCCCCTGCCA
Downstream region at tRNA end position 
ccacagtcac
Secondary structure (Cloverleaf model)
>WENV170657248	Trp	CCA
                   t      GCCA ccacagtcac
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     A - T          T T
                    T     C T T C C     A
      T A A        A      | | + | |     G
    T       C T C G       G A G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          G     AGGTT
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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