The detailed information of tRNA gene sequence


Sequence ID>WENV170657254
Genome IDJTFO01111230
Search identical group
Phylum/Class[JTFO] activated sludge metagenome; CETP activated sludge from laboratory augmented bioreactor treating industrial wastewater
Species
Start position on genome 154
End posion on genome 243
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gcatgaatta
tRNA gene sequence 
GGAGAGGTGGCTGAGTGGCTAAAGGCACCGGTCTTGAAAACCGGCGACCCTCGAGGGGGT
CCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
atttaaggtg
Secondary structure (Cloverleaf model)
>WENV170657254	Ser	TGA
                   a      GCCA atttaaggtg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G T G G G     C
    G         + | |                 T T
    C       A G G C
      T A A        A     CGACCCTCGAGGGGGTCC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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