The detailed information of tRNA gene sequence


Sequence ID>WENV170657265
Genome IDJTFO01114325
Search identical group
Phylum/Class[JTFO] activated sludge metagenome; CETP activated sludge from laboratory augmented bioreactor treating industrial wastewater
Species
Start position on genome 246
End posion on genome 170
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
aaaatgatgt
tRNA gene sequence 
CGGGGCGTAGCGCAGCCTGGTAGCGCACCTGCTTCGGGAGCAGGGGGCCGGAGGTTCAAA
TCCTCTCGCCCCGACCA
Downstream region at tRNA end position 
ttaattttca
Secondary structure (Cloverleaf model)
>WENV170657265	Pro	CGG
                   t      ACCA ttaattttca
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T C T C C     A
      C G A        A      + | | | |     A
    C       C G C G       G G A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGCC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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