The detailed information of tRNA gene sequence


Sequence ID>WENV170657275
Genome IDJTFO01116028
Search identical group
Phylum/Class[JTFO] activated sludge metagenome; CETP activated sludge from laboratory augmented bioreactor treating industrial wastewater
Species
Start position on genome 185
End posion on genome 274
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gagtcgcgct
tRNA gene sequence 
GGACAGGTGGCCGAGTGGTTTAAGGCAGCGGTCTTGAAAACCGCCGTAGGTGGAAGCCTA
CCGTGGGTTCGAATCCCACCCTGTCCGCCA
Downstream region at tRNA end position 
ccttggtata
Secondary structure (Cloverleaf model)
>WENV170657275	Ser	TGA
                   t      GCCA ccttggtata
                     G - C
                     G - C
                     A - T
                     C - G
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      T T A        A     CGTAGGTGGAAGCCTACC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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