The detailed information of tRNA gene sequence


Sequence ID>WENV170657283
Genome IDJTFO01117132
Search identical group
Phylum/Class[JTFO] activated sludge metagenome; CETP activated sludge from laboratory augmented bioreactor treating industrial wastewater
Species
Start position on genome 277
End posion on genome 364
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
caaaatgccg
tRNA gene sequence 
GGAGAGATGGCAGAGTGGTCGATCGCGGCGGTCTTGAAAACCGTTGAACTGAAAGGTTCC
GGGGGTTCGAATCCCTCTCTCTCCGCAA
Downstream region at tRNA end position 
taaacactga
Secondary structure (Cloverleaf model)
>WENV170657283	Ser	TGA
                   g      GCAA taaacactga
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G A C G       G G G G G     C
    G       +   | |                 T T
    T       T C G C
      C G A        G     TGAACTGAAAGGTTCC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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