The detailed information of tRNA gene sequence


Sequence ID>WENV170657301
Genome IDJTFO01121075
Search identical group
Phylum/Class[JTFO] activated sludge metagenome; CETP activated sludge from laboratory augmented bioreactor treating industrial wastewater
Species
Start position on genome 317
End posion on genome 241
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gcaccggtgg
tRNA gene sequence 
GGCGGAGTAGCTCAGTAGGTTAGAGCAGAGGAATCATAATCCTTGTGTCGGCGGTTCGAA
TCCGTCCTCCGCTACCA
Downstream region at tRNA end position 
ttttattttc
Secondary structure (Cloverleaf model)
>WENV170657301	Met	CAT
                   g      ACCA ttttattttc
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     C T G C C     A
      T G A        A      | + | | |     G
    A       C T C G       G G C G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GTGTC
                    G + T
                    A - T
                    G - C
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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