The detailed information of tRNA gene sequence


Sequence ID>WENV170657334
Genome IDJTFO01127270
Search identical group
Phylum/Class[JTFO] activated sludge metagenome; CETP activated sludge from laboratory augmented bioreactor treating industrial wastewater
Species
Start position on genome 742
End posion on genome 653
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
caggtggaat
tRNA gene sequence 
GGACAGGTGGCCGAGTGGTTGAAGGCGCACGCCTGGAACGCGTGTATAGGGGCAACTCTA
TCGAGGGTTCGAATCCCTCTCTGTCCGCCA
Downstream region at tRNA end position 
cgctgttaca
Secondary structure (Cloverleaf model)
>WENV170657334	Ser	GGA
                   t      GCCA cgctgttaca
                     G - C
                     G - C
                     A - T
                     C - G
                     A - T
                     G - C
                     G + T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      T G A        G     TATAGGGGCAACTCTATC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       C
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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