The detailed information of tRNA gene sequence


Sequence ID>WENV170657336
Genome IDJTFO01127909
Search identical group
Phylum/Class[JTFO] activated sludge metagenome; CETP activated sludge from laboratory augmented bioreactor treating industrial wastewater
Species
Start position on genome 342
End posion on genome 256
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
aagtctgttT
tRNA gene sequence 
GGAGAGATGTCCGAGCGGTCGAAGGAGGCGGTCTTGAAAACCGTTGAGGCGCGAGTCTCC
GAGGGTTCGAATCCCCCTCTCTCCGTtc
Downstream region at tRNA end position 
attcatcgat
Secondary structure (Cloverleaf model)
>WENV170657336	Ser	TGA
                   T      GTtc attcatcgat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C C C C C     A
      C G A        G      |   | | |     G
    G       G C C T       G A G G G     C
    G         | | |                 T T
    T       A G G A
      C G A        G     TGAGGCGCGAGTCTCC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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