The detailed information of tRNA gene sequence


Sequence ID>WENV170657337
Genome IDJTFO01127909
Search identical group
Phylum/Class[JTFO] activated sludge metagenome; CETP activated sludge from laboratory augmented bioreactor treating industrial wastewater
Species
Start position on genome 220
End posion on genome 132
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ttttttataT
tRNA gene sequence 
GGAGAGGTGCGAGAGCGGCCGAATCGGGCTCCCTGCTAAGGAGTTGACCTGGTAACGGGT
CCGGGGGTTCGAATCCCCCCCTCTCCGTtt
Downstream region at tRNA end position 
ttgatttttt
Secondary structure (Cloverleaf model)
>WENV170657337	Ser	GCT
                   T      GTtt ttgatttttt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C C C     A
      C G A        G      | | | | |     G
    G       G A G C       G G G G G     C
    G         | | |                 T T
    C       A T C G
      C G A        G     TGACCTGGTAACGGGTCC
                    G + T
                    C - G
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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