The detailed information of tRNA gene sequence


Sequence ID>WENV170657339
Genome IDJTFO01129275
Search identical group
Phylum/Class[JTFO] activated sludge metagenome; CETP activated sludge from laboratory augmented bioreactor treating industrial wastewater
Species
Start position on genome 454
End posion on genome 365
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
attctgaaca
tRNA gene sequence 
GGAAAGATGCCGGAGTGGTCGATCGGGGCGGTCTCGAAAACCGTTGTACCCTCATGGGTA
CCAAGGGTTCGAATCCCTTTCTTTCCGCAA
Downstream region at tRNA end position 
taattacctg
Secondary structure (Cloverleaf model)
>WENV170657339	Ser	CGA
                   a      GCAA taattacctg
                     G - C
                     G - C
                     A - T
                     A - T
                     A - T
                     G - C
                     A - T          T A
                    T     T T C C C     A
      T G A        G      | | | | |     G
    G       G G C C       A A G G G     C
    G       + | | |                 T T
    T       T C G G
      C G A        G     TGTACCCTCATGGGTACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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