The detailed information of tRNA gene sequence


Sequence ID>WENV170657420
Genome IDJTFO01148144
Search identical group
Phylum/Class[JTFO] activated sludge metagenome; CETP activated sludge from laboratory augmented bioreactor treating industrial wastewater
Species
Start position on genome 515
End posion on genome 590
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
gtccaagcac
tRNA gene sequence 
GGTCCCTTCGTCTAGTGGTCTAGGACGCCGGGTTCTCAGCCCGGTAACAGGGGTTCGAAC
CCCCTAGGGACTGCCA
Downstream region at tRNA end position 
tgtaatcaaa
Secondary structure (Cloverleaf model)
>WENV170657420	Glu	CTC
                   c      GCCA tgtaatcaaa
                     G + T
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     T - A          C A
                    T     T C C C C     A
      T G A        C      | | | | |     G
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    T       G G A C
      C T A        G     TAAC
                    C - G
                    C - G
                    G - C
                    G - C
                    G - C
                  T       G
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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