The detailed information of tRNA gene sequence


Sequence ID>WENV170657427
Genome IDJTFO01148875
Search identical group
Phylum/Class[JTFO] activated sludge metagenome; CETP activated sludge from laboratory augmented bioreactor treating industrial wastewater
Species
Start position on genome 200
End posion on genome 124
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
tcagttttgt
tRNA gene sequence 
CGGGGTGTAGCTCAGCCTGGTAGAGCACTGTCTTCGGGAGGCAGGGGTCGTAGGTTCAAA
TCCTGTCACCCCGACCA
Downstream region at tRNA end position 
cttgctgaat
Secondary structure (Cloverleaf model)
>WENV170657427	Pro	CGG
                   t      ACCA cttgctgaat
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     T G T C C     A
      C G A        A      + + | | |     A
    C       C T C G       G T A G G     C
    T       | | | |                 T T
    G       G A G C
      G T A        A     GGGTC
                    C - G
                    T - A
                    G - C
                    T + G
                    C - G
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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