The detailed information of tRNA gene sequence


Sequence ID>WENV170657443
Genome IDJTFO01152932
Search identical group
Phylum/Class[JTFO] activated sludge metagenome; CETP activated sludge from laboratory augmented bioreactor treating industrial wastewater
Species
Start position on genome 232
End posion on genome 309
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
acctaaaagt
tRNA gene sequence 
GGAGCTGTAGCTCAATTCGGTTAGAGCGCTGGCCTGTCACGCCAGAGGTCGCGGGTTCAA
GTCCCGTCAGCTCCGCCA
Downstream region at tRNA end position 
cttttaacgc
Secondary structure (Cloverleaf model)
>WENV170657443	Asp	GTC
                   t      GCCA cttttaacgc
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     T - A
                     G - C          T G
                    T     T G C C C     A
    T T A A        A      + | | | |     A
  C         C T C G       G C G G G     C
  G         | | | |                 T T
  G         G A G C
    T T A          G     AGGTC
                    C - G
                    T - A
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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