The detailed information of tRNA gene sequence


Sequence ID>WENV170657507
Genome IDJTFO01171368
Search identical group
Phylum/Class[JTFO] activated sludge metagenome; CETP activated sludge from laboratory augmented bioreactor treating industrial wastewater
Species
Start position on genome 178
End posion on genome 268
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cgctttgccc
tRNA gene sequence 
GGAGGGCTGGCAGAGTTGGTTGATTGCACCGGTCTTGAAAACCGGCATACCTTCACGGGT
ATCTGGGGTTCGAATCCCTAGCCCTCCGCCA
Downstream region at tRNA end position 
ttccattatg
Secondary structure (Cloverleaf model)
>WENV170657507	Ser	TGA
                   c      GCCA ttccattatg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     C - G          T A
                    T     A T C C C     A
    T T G A        G      | + | | |     G
  G         G A C G       T G G G G     C
  G         + | | |                 T T
  T         T T G C
    T G A          A     CATACCTTCACGGGTATC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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