The detailed information of tRNA gene sequence


Sequence ID>WENV170657523
Genome IDJTFO01179053
Search identical group
Phylum/Class[JTFO] activated sludge metagenome; CETP activated sludge from laboratory augmented bioreactor treating industrial wastewater
Species
Start position on genome 22
End posion on genome 97
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gttacgcaac
tRNA gene sequence 
AGGCCAGTAGCTCAACTGGCAGAGCAGCGGTCTCCAAAACCGCAGGTTGGGGGTTCGAGT
CCCTCCTGGCCTGCCA
Downstream region at tRNA end position 
ttcctaatcg
Secondary structure (Cloverleaf model)
>WENV170657523	Trp	CCA
                   c      GCCA ttcctaatcg
                     A - T
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          T G
                    T     C T C C C     A
      C A A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     AGGTT
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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