The detailed information of tRNA gene sequence


Sequence ID>WENV170657531
Genome IDJTFP01000133
Search identical group
Phylum/Class[JTFP] activated sludge metagenome; sludge from laboratory unaugmented bioreactor treating industrial wastewater
Species
Start position on genome 222
End posion on genome 146
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tattttgtgt
tRNA gene sequence 
AGGGGCGTAGTTCTAATTGGTAGAACAGCGGTCTCCAAAACCGATGGTTGGGGGTTCGAG
TCCCTCCGCCCCTGCCA
Downstream region at tRNA end position 
gttgcacctc
Secondary structure (Cloverleaf model)
>WENV170657531	Trp	CCA
                   t      GCCA gttgcacctc
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     C T C C C     A
      A A T        A      | + | | |     G
    T       C T T G       G G G G G     C
    T       | | | |                 T T
    G       G A A C
      G T A        A     TGGTT
                    G   A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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