The detailed information of tRNA gene sequence


Sequence ID>WENV170657550
Genome IDJTFP01001218
Search identical group
Phylum/Class[JTFP] activated sludge metagenome; sludge from laboratory unaugmented bioreactor treating industrial wastewater
Species
Start position on genome 594
End posion on genome 500
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
nnnagagcct
tRNA gene sequence 
GGAGAAGTGGCTGAGCTGGCCGAAGGCACTCCCCTGCTAAGGGAGCATTCGGGATTAAAA
CCGAATCGAGGGTTCGAATCCCTCCTTCTCCGCCA
Downstream region at tRNA end position 
cttaaacttt
Secondary structure (Cloverleaf model)
>WENV170657550	Ser	GCT
                   t      GCCA cttaaacttt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     C T C C C     A
    T C G A        G      | | | | |     G
  G         G T C G       G A G G G     C
  G           + | |                 T T
  C         A G G C
    C G A          A     CATTCGGGATTAAAACCGAATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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