The detailed information of tRNA gene sequence


Sequence ID>WENV170657593
Genome IDJTFP01004067
Search identical group
Phylum/Class[JTFP] activated sludge metagenome; sludge from laboratory unaugmented bioreactor treating industrial wastewater
Species
Start position on genome 151
End posion on genome 227
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
aaaggcgatt
tRNA gene sequence 
GGGTCTGTAGCTCAGTTGGTTAGAGCGCACCCCTGATAAGGGTGAGGTCGGCAGTTCGAA
TCTGCCCAGACCCACCA
Downstream region at tRNA end position 
attgtcgtgg
Secondary structure (Cloverleaf model)
>WENV170657593	Ile	GAT
                   t      ACCA attgtcgtgg
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     T - A
                     G - C          T A
                    T     C C G T C     A
      T G A        A      | | | | |     G
    T       C T C G       G G C A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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