The detailed information of tRNA gene sequence


Sequence ID>WENV170657613
Genome IDJTFP01005098
Search identical group
Phylum/Class[JTFP] activated sludge metagenome; sludge from laboratory unaugmented bioreactor treating industrial wastewater
Species
Start position on genome 489
End posion on genome 577
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
atataaatgt
tRNA gene sequence 
GGATCTTTGGCAGAGTTGGTCGATTGCACCGGTCTTGAAAACCGGCGAGGGTTATACCTC
CCAGAGTTCGAATCTCTGAGGGTCCACCA
Downstream region at tRNA end position 
ctttaaaatc
Secondary structure (Cloverleaf model)
>WENV170657613	Ser	TGA
                   t      ACCA ctttaaaatc
                     G - C
                     G - C
                     A - T
                     T + G
                     C - G
                     T + G
                     T - A          T A
                    T     G T C T C     A
    T T G A        G      | | | | |     G
  G         G A C G       C A G A G     C
  G         + | | |                 T T
  T         T T G C
    C G A          A     CGAGGGTTATACCTCC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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