The detailed information of tRNA gene sequence


Sequence ID>WENV170657623
Genome IDJTFP01005359
Search identical group
Phylum/Class[JTFP] activated sludge metagenome; sludge from laboratory unaugmented bioreactor treating industrial wastewater
Species
Start position on genome 1340
End posion on genome 1264
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
aacagtgata
tRNA gene sequence 
CGGCGTATAGCGCAGTCTGGTAGCGCACTTCGTTCGGGACGAAGGGGTCGGAGGTTCGAA
TCCTCTTACGCCGACCA
Downstream region at tRNA end position 
gacttttcat
Secondary structure (Cloverleaf model)
>WENV170657623	Pro	CGG
                   a      ACCA gacttttcat
                     C - G
                     G - C
                     G - C
                     C - G
                     G - C
                     T - A
                     A - T          T A
                    T     T C T C C     A
      T G A        A      + | | | |     G
    C       C G C G       G G A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    C - G
                    T - A
                    T - A
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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