The detailed information of tRNA gene sequence


Sequence ID>WENV170657638
Genome IDJTFP01006030
Search identical group
Phylum/Class[JTFP] activated sludge metagenome; sludge from laboratory unaugmented bioreactor treating industrial wastewater
Species
Start position on genome 278
End posion on genome 373
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ttcaatgaac
tRNA gene sequence 
GGAGAGGTGGCCGAGCTAGGCTGAAGGCGCTCGCCTGCTAAGCGAGTATAGGGGCGTAAA
CCTCTATCGAGGGTTCAAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
tcccctggag
Secondary structure (Cloverleaf model)
>WENV170657638	Ser	GCT
                   c      GCCA tcccctggag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
    T C G A        G      | | | | |     A
  A         G C C G       G A G G G     C
  G           | | |                 T T
  G         A G G C
    C T G A        G     TATAGGGGCGTAAACCTCTATC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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